REAL

Fine tuning of the catalytic activity of colicin E7 nuclease domain by systematic N-terminal mutations

Németh, Eszter and Koertvelyesi Tamas, and Thulstrup Peter W, and Christensen Hans E M, and Kozisek Milan, and Czene, Anikó and Gyurcsik, Béla (2014) Fine tuning of the catalytic activity of colicin E7 nuclease domain by systematic N-terminal mutations. PROTEIN SCIENCE, 23 (8). pp. 1113-1122. ISSN 0961-8368

[img]
Preview
Text
Protein_Science_2014_Gyurcsik_u_120421.45808.pdf

Download (874kB) | Preview

Abstract

The nuclease domain of colicin E7 (NColE7) promotes the nonspecific cleavage of nucleic acids at its C-terminal HNH motif. Interestingly, the deletion of four N-terminal residues (446-449 NColE7=KRNK) resulted in complete loss of the enzyme activity. R447A mutation was reported to decrease the nuclease activity, but a detailed analysis of the role of the highly positive and flexible N-terminus is still missing. Here, we present the study of four mutants, with a decreased activity in the following order: NColE7 >> KGNK > KGNG similar to GGNK > GGNG. At the same time, the folding, the metal-ion, and the DNA-binding affinity were unaffected by the mutations as revealed by linear and circular dichroism spectroscopy, isothermal calorimetric titrations, and gel mobility shift experiments. Semiempirical quantum chemical calculations and molecular dynamics simulations revealed that K446, K449, and/or the N-terminal amino group are able to approach the active centre in the absence of the other positively charged residues. The results suggested a complex role of the N-terminus in the catalytic process that could be exploited in the design of a controlled nuclease.

Item Type: Article
Subjects: Q Science / természettudomány > QD Chemistry / kémia
SWORD Depositor: MTMT SWORD
Depositing User: MTMT SWORD
Date Deposited: 09 Feb 2015 12:49
Last Modified: 28 Feb 2017 00:15
URI: http://real.mtak.hu/id/eprint/21428

Actions (login required)

Edit Item Edit Item