Items where Author is "Nyerges, Ákos"

Article

Apjok, Gábor and Számel, Mónika and Christodoulou, Chryso and Seregi, Viktória and Vásárhelyi, Bálint Márk and Stirling, Tamás and Eszenyi, Bálint and Sári, Tóbiás and Vidovics, Fanni and Nagrand, Erika and Kovács, Dorina and Szili, Petra and Lantos, Ildikó Ilona and Méhi, Orsolya Katinka and Jangir, Pramod Kumar and Herczeg, Róbert and Gálik, Bence and Urbán, Péter and Gyenesei, Attila and Draskovits, Gábor and Nyerges, Ákos and Fekete, Gergely and Bodai, László and Zsindely, Nóra and Dénes, Béla and Yosef, Ido and Qimron, Udi and Papp, Balázs and Pál, Csaba and Kintses, Bálint (2023) Characterization of antibiotic resistomes by reprogrammed bacteriophage-enabled functional metagenomics in clinical strains. NATURE MICROBIOLOGY, 8 (3). pp. 410-423. ISSN 2058-5276

Shukla, Ranti Dev and Zvara, Ágnes and Avramucz, Ákos and Biketova, Alona Yu and Nyerges, Ákos and Puskás, László G. and Fehér, Tamás (2022) inPOSE: A Flexible Toolbox for Chromosomal Cloning and Amplification of Bacterial Transgenes. MICROORGANISMS, 10 (2). pp. 1-31. ISSN 2076-2607

Durcik, Martina and Skok, Žiga and Ilaš, Janez and Zidar, Nace and Zega, Anamarija and Szili, Petra Éva and Draskovits, Gábor and Révész, Tamás and Nyerges, Ákos and Pál, Csaba (2021) Hybrid Inhibitors of DNA Gyrase A and B: Design, Synthesis and Evaluation. PHARMACEUTICS, 13 (1). pp. 1-17. ISSN 1999-4923

Durcik, Martina and Nyerges, Ákos and Skok, Žiga and Gramec Skledar, Darja and Trontelj, Jurij and Révész, Tamás and Draskovits, Gábor and Szili, Petra Éva and Daruka, Lejla and Pál, Csaba (2021) New Dual ATP-Competitive Inhibitors of Bacterial DNA Gyrase and Topoisomerase IV Active Against ESKAPE Pathogens. EUROPEAN JOURNAL OF MEDICINAL CHEMISTRY, 213. pp. 1-22. ISSN 0223-5234 (print); 1768-3254 (online)

Fois, Benedetta and Skok, Ziga and Tomasic, Tihomir and Ilaš, Janez and Zidar, Nace and Szili, Petra and Draskovits, Gábor and Nyerges, Ákos and Pál, Csaba (2020) Dual Escherichia coli DNA Gyrase A and B Inhibitors with Antibacterial Activity. CHEMMEDCHEM, 15 (3). pp. 265-269. ISSN 1860-7179

Aparicio, Tomas and Nyerges, Ákos and Martinez-Garcia, Esteban and de Lorenzo, Victor (2020) High-Efficiency Multi-site Genomic Editing of Pseudomonas putida through Thermoinducible ssDNA Recombineering. ISCIENCE, 23 (3). ISSN 2589-0042

Wannier, Timothy M. and Nyerges, Ákos and Kuchwara, Helene M. and Czikkely, Márton and Balogh, Dávid and Pál, Csaba (2020) Improved bacterial recombineering by parallelized protein discovery. Proceedings of the National Academy of Sciences, 117 (24). pp. 13689-13698. ISSN 0027-8424

Hueso-Gil, Angeles and Nyerges, Ákos and Pál, Csaba and Calles, Belén and de Lorenzo, Victor (2020) Multiple-Site Diversification of Regulatory Sequences Enables Interspecies Operability of Genetic Devices. ACS SYNTHETIC BIOLOGY, 9 (1). pp. 104-114. ISSN 2161-5063

Nyerges, Ákos and Tomašič, Tihomir and Durcik, Martina and Révész, Tamás and Szili, Petra and Draskovits, Gábor and Bogár, Ferenc and Daruka, Lejla and Kintses, Bálint and Vásárhelyi, Bálint and Földesi, Imre and Kata, Diána and Pál, Csaba (2020) Rational design of balanced dual-targeting antibiotics with limited resistance. PLOS BIOLOGY, 18 (10). pp. 1-31. ISSN 1544-9173 (print); 1545-7885 (online)

Lamut, Andraž and Skok, Žiga and Barančoková, Michaela and Gutierrez, Lucas J. and Cruz, Cristina D. and Draskovits, Gábor and Szili, Petra Éva and Nyerges, Ákos and Pál, Csaba (2020) Second generation 4,5,6,7-tetrahydrobenzo[d]thiazoles as novel DNA gyrase inhibitors. FUTURE MEDICINAL CHEMISTRY, 12 (4). pp. 277-297. ISSN 1756-8919 (print); 1756-8927 (online)

Csörgő, Bálint and Nyerges, Ákos and Pál, Csaba (2020) Targeted Mutagenesis of Multiple Chromosomal Regions in Microbes. CURRENT OPINION IN MICROBIOLOGY, 57. pp. 22-30. ISSN 1369-5274

Szili, Petra and Draskovits, Gábor and Révész, Tamás and Bogár, Ferenc and Balogh, Dávid and Martinek, Tamás and Daruka, Lejla and Spohn, Réka and Vásárhelyi, Bálint Márk and Czikkely, Márton and Kintses, Bálint and Grézal, Gábor and Ferenc, Györgyi and Pál, Csaba and Nyerges, Ákos (2019) Rapid evolution of reduced susceptibility against a balanced dual targeting antibiotic through stepping-stone mutations. ANTIMICROBIAL AGENTS AND CHEMOTHERAPY. ISSN 0066-4804

Kintses, Bálint and Méhi, Orsolya Katinka and Ari, Eszter and Számel, Mónika and Györkei, Ádám and Jangir, Pramod Kumar and Nagy, István and Pál, Ferenc and Fekete, Gergely and Tengölics, Roland and Nyerges, Ákos and Likó, István and Bálint, Anita and Molnár, Tamás and Vásárhelyi, Bálint Márk and Bustamante, Misshelle and Papp, Balázs and Pál, Csaba (2019) Phylogenetic barriers to horizontal transfer of antimicrobial peptide resistance genes in the human gut microbiota. NATURE MICROBIOLOGY. ISSN 2058-5276

Nyerges, Ákos and Bálint, Balázs and Cseklye, Judit and Nagy, István and Pál, Csaba and Fehér, Tamás (2019) CRISPR-interference-based modulation of mobile genetic elements in bacteria. Synthetic biology (Oxford, England), 4 (1). ISSN 2397-7000

Guzmán, Gabriela I and Sandberg, Troy E and LaCroix, Ryan A and Nyerges, Ákos and Papp, Henrietta and de Raad, Markus and King, Zachary A and Hefner, Ying and Northen, Trent R and Notebaart, Richard A. and Pál, Csaba and Palsson, Bernhard O and Papp, Balázs and Feist, Adam M (2019) Enzyme promiscuity shapes adaptation to novel growth substrates. Molecular Systems Biology, 15 (4). ISSN 1744-4292, ESSN: 1744-4292

Apjok, Gábor and Boross, Gábor and Nyerges, Ákos and Fekete, Gergely and Lázár, Viktória and Papp, Balázs and Pál, Csaba and Csörgő, Bálint (2019) Limited evolutionary conservation of the phenotypic effects of antibiotic resistance mutations. MOLECULAR BIOLOGY AND EVOLUTION, 36 (8). pp. 1601-1611. ISSN 0737-4038

Aparicio, Tomas and Nyerges, Ákos and Nagy, István and Pál, Csaba and Martinez-Garcia, Esteban (2019) Mismatch repair hierarchy of Pseudomonas putida revealed by mutagenic ssDNA recombineering of the pyrF gene. ENVIRONMENTAL MICROBIOLOGY. pp. 1-35. ISSN 1462-2912

Kintses, Bálint and Méhi, Orsolya Katinka and Ari, Eszter and Számel, Mónika and Györkei, Ádám and Jangir, Pramod Kumar and Nagy, István and Pál, Ferenc and Fekete, Gergely and Tengölics, Roland and Nyerges, Ákos and Likó, István and Bálint, Anita and Molnár, Tamás and Bálint, Balázs and Vásárhelyi, Bálint Márk and Bustamante, Misshelle and Papp, Balázs and Pál, Csaba (2019) Phylogenetic barriers to horizontal transfer of antimicrobial peptide resistance genes in the human gut microbiota. NATURE MICROBIOLOGY, 4 (3). pp. 447-458. ISSN 2058-5276

Szili, Petra and Draskovits, Gábor and Révész, Tamás and Bogár, Ferenc and Balogh, Dávid and Martinek, Tamás and Daruka, Lejla and Spohn, Réka and Vásárhelyi, Bálint Márk and Czikkely, Márton and Kintses, Bálint and Grézal, Gábor and Ferenc, Györgyi and Pál, Csaba and Nyerges, Ákos (2019) Rapid Evolution of Reduced Susceptibility against a Balanced Dual-Targeting Antibiotic through Stepping-Stone Mutations. ANTIMICROBIAL AGENTS AND CHEMOTHERAPY, 63 (9). pp. 1-39. ISSN 0066-4804 (print); 1098-6596 (online)

Tiz, Davide Benedetto and Skok, Ziga and Durcik, Martina and Tomasic, Tihomir and Peterlin Masic, Lucija and Draskovits, Gábor and Révész, Tamás and Nyerges, Ákos and Pál, Csaba (2019) An optimised series of substituted N-phenylpyrrolamides as DNA gyrase B inhibitors. EUROPEAN JOURNAL OF MEDICINAL CHEMISTRY, 167. pp. 269-290. ISSN 0223-5234

Nyerges, Ákos and Csörgő, Bálint and Draskovits, Gábor and Kintses, Bálint and Szili, Petra and Ferenc, Györgyi and Révész, Tamás and Ari, Eszter and Nagy, István and Bálint, Balázs and Vásárhelyi, Bálint and Bihari, Péter and Számel, Mónika and Balogh, Dávid and Papp, Henrietta and Kalapis, Dorottya and Papp, Balázs and Pál, Csaba (2018) Directed evolution of multiple genomic loci allows the prediction of antibiotic resistance. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 115 (25). E5726-E5735. ISSN 0027-8424

Lázár, Viktória and Martins, Ana and Spohn, Réka and Daruka, Lejla and Grézal, Gábor and Fekete, Gergely and Számel, Mónika and Jangir, Pramod Kumar and Kintses, Bálint and Csörgő, Bálint and Nyerges, Ákos and Györkei, Ádám and Kincses, András and Dér, András and Walter, Fruzsina and Deli, Mária Anna and Zsoldiné Urbán, Edit and Hegedűs, Zoltán and Méhi, Orsolya Katinka and Bálint, Balázs and Nagy, István and Martinek, Tamás and Papp, Balázs and Pál, Csaba (2018) Antibiotic-resistant bacteria show widespread collateral sensitivity to antimicrobial peptides. NATURE MICROBIOLOGY, 3 (6). pp. 718-731. ISSN 2058-5276

Nyerges, Ákos and Csörgő, Bálint and Draskovits, Gábor and Kintses, Bálint and Szili, Petra and Ferenc, Györgyi and Révész, Tamás and Ari, Eszter and Nagy, István and Bálint, Balázs and Vásárhelyi, Bálint Márk and Bihari, Péter and Számel, Mónika and Balogh, Dávid and Papp, Henrietta and Kalapis, Dorottya and Papp, Balázs and Pál, Csaba (2018) Directed evolution of multiple genomic loci allows the prediction of antibiotic resistance. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 115 (25). E5726-E5735. ISSN 0027-8424

Durcik, M. and Lovison, D. and Skok, Z. and Cruz, C. D. and Tammela, P. and Draskovits, Gábor and Nyerges, Ákos and Pál, Csaba (2018) New N-phenylpyrrolamide DNA gyrase B inhibitors: Optimization of efficacy and antibacterial activity. EUROPEAN JOURNAL OF MEDICINAL CHEMISTRY, 154. pp. 117-132. ISSN 0223-5234

Umenhoffer, Kinga and Draskovits, Gábor and Nyerges, Ákos and Karcagi, Ildikó and Bogos, Balázs and Tímár, Edit and Csörgő, Bálint and Nagy, István and Fehér, Tamás and Pál, Csaba and Pósfai, György (2017) Genome-Wide Abolishment of Mobile Genetic Elements Using Genome Shuffling and CRISPR/Cas-Assisted MAGE Allows the Efficient Stabilization of a Bacterial Chassis. ACS SYNTHETIC BIOLOGY, 6 (8). pp. 1471-1483. ISSN 2161-5063

Bódi, Zoltán and Farkas, Zoltán and Nevozhay, D. and Kalapis, Dorottya and Lázár, Viktória and Csörgő, Bálint and Nyerges, Ákos and Szamecz, Béla and Fekete, Gergely and Papp, Balázs and Pál, Csaba (2017) Phenotypic heterogeneity promotes adaptive evolution. PLOS BIOLOGY, 15 (5). pp. 1-26. ISSN 1544-9173

Csörgő, Bálint and Nyerges, Ákos and Pósfai, György and Fehér, Tamás (2016) System-level genome editing in microbes. CURRENT OPINION IN MICROBIOLOGY, 33. pp. 113-122. ISSN 1369-5274

Nyerges, Ákos and Csörgő, Bálint and Nagy, István and Bálint, Balázs and Bihari, Péter and Lázár, Viktória and Apjok, Gábor and Umenhoffer, Kinga and Bogos, Balázs and Pósfai, György and Pál, Csaba (2016) A highly precise and portable genome engineering method allows comparison of mutational effects across bacterial species. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 113 (9). pp. 2502-2507. ISSN 0027-8424

Nyerges, Ákos and Csorgő, Bálint and Nagy, István and Latinovics, Dóra and Szamecz, Béla and Pósfai, György and Pál, Csaba (2014) Conditional DNA repair mutants enable highly precise genome engineering. NUCLEIC ACIDS RESEARCH, 42 (8). e62. ISSN 0305-1048

Lázár, Viktória and Nagy, István and Spohn, Réka and Csörgő, Bálint and Györkei, Ádám and Nyerges, Ákos and Horváth, Balázs and Vörös, Andrea and Hrtyan, Mónika and Bogos, Balázs and Méhi, Orsolya Katinka and Fekete, Gergely and Szappanos, Balázs and Papp, Balázs and Pál, Csaba (2014) Genome-wide analysis captures the determinants of the antibiotic cross-resistance interaction network. Nature communications, 5. p. 4352. ISSN 2041-1723

Méhi, Orsolya Katinka and Bogos, Balázs and Csörgő, Bálint and Pál, Ferenc and Nyerges, Ákos and Papp, Balázs and Pál, Csaba (2014) Perturbation of iron homeostasis promotes the evolution of antibiotic resistance. MOLECULAR BIOLOGY AND EVOLUTION, 31 (10). pp. 2793-2804. ISSN 0737-4038