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Optimization of reversed-phase solid-phase extraction for shotgun proteomics analysis

Bugyi, Fanni and Turiák, Lilla and Drahos, László and Tóth, Gábor (2023) Optimization of reversed-phase solid-phase extraction for shotgun proteomics analysis. JOURNAL OF MASS SPECTROMETRY. ISSN 1076-5174

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Abstract

Reversed-phase solid-phase extraction (SPE) is the method of choice for the purification of proteomics samples. Even though the efficacy of SPE methods is sample type-dependent, the manufacturers' protocols are used in most studies. Using an optimized SPE method can lead to a substantial gain in identification and recovery. In this tutorial, we give a brief introduction to the most important parameters influencing SPE performance, and we present a short workflow (16 measurements) for optimizing the SPE procedure. This is complemented by method performance assessment instructions and a short troubleshooting guide to help users further understand and investigate their SPE methods.

Item Type: Article
Subjects: Q Science / természettudomány > QD Chemistry / kémia > QD01 Analytical chemistry / analitikai kémia
Depositing User: Dr. Lilla Turiák
Date Deposited: 17 Sep 2023 09:30
Last Modified: 17 Sep 2023 09:30
URI: http://real.mtak.hu/id/eprint/173793

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